I have not heard of anyone burning out a 2-56 tap with a wire EDM....not saying it can't be done, but perhaps building another head is a better idea. My guess in the dark - if there are leaks, the 2-56 screws do not give enough pre-load.
A bolt is basically a tension spring. Torquing it into a block makes it stretch out longer. It's tensile strength makes it try to pull back to original length, giving a clamping force, or pre-load, measured in pounds or newtons. Re-usable bolts are usually torqued to 3/4 of their elastic limit - torque tables are published by the manufacturers.
I'd suggest a combination of more, bigger, and higher quality bolts. ARP is the best bolt producer out there today, you might contact them for suggestions as to small bolt quality.
Also, experience has taught me that all bolts get dressings. Mains and head studs get graphite / molybdenum assembly lube, which reduces torque by 30%. Flywheel bolts get Lock-tite, exhaust and wheel lugs get Never-seez, water pump bolts get water-resistant sealant, outside engine bolts going through a gasket get Honda sealant, electrical connection studs get dielectric silicone grease.
I may be stating the obvious to the master, but I always appreciate pedantic help in technical matters